Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC064801.2-201ENST00000625052 1303 ntBASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 MARCH9-202ENST00000548358 1668 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 NDUFB11-201ENST00000276062 948 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 PGAP2-219ENST00000479072 894 ntTSL 3 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC007622.1-201ENST00000488371 535 ntBASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 CD44-224ENST00000526669 870 ntTSL 5 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 LINC00514-203ENST00000573465 313 ntTSL 5 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 AC007274.3-201ENST00000619838 385 ntBASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC22.28■■□□□ 1.16
RIMBP3Q9UFD9 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 RN7SL832P-201ENST00000607781 1756 ntBASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 PNLIPRP2-201ENST00000579578 1482 ntAPPRIS P5 TSL 2 BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 FLJ38576-201ENST00000623820 2459 ntBASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 IMPDH1P5-201ENST00000439688 1540 ntBASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 KRT8P38-201ENST00000441370 1430 ntBASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 TIMM10-201ENST00000257245 680 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 POU5F1-202ENST00000441888 1055 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 IGKV2-28-201ENST00000482769 390 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 Metazoa_SRP.153-201ENST00000620153 341 ntBASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RIMBP3Q9UFD9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC22.27■■□□□ 1.15
RIMBP3Q9UFD9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC22.27■■□□□ 1.15
RIMBP3Q9UFD9 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 COPS7A-201ENST00000229251 1721 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 MTA3-204ENST00000406911 2041 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 CMTM5-204ENST00000382809 378 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 LINC00685-201ENST00000391707 428 ntTSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 ASLP1-201ENST00000428790 637 ntBASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AL356289.1-203ENST00000439795 789 ntTSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AC092284.1-201ENST00000511386 1289 ntBASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 SMCO4-202ENST00000525141 889 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 PILRB-213ENST00000609309 993 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 MGST3-214ENST00000627653 1130 ntTSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 WRB-202ENST00000380708 1464 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 DRD2-204ENST00000538967 1493 ntAPPRIS ALT1 TSL 5 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC22.26■■□□□ 1.15
RIMBP3Q9UFD9 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 SRSF9P1-201ENST00000399149 530 ntBASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 AL356583.3-201ENST00000412354 417 ntBASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 EIF5A-207ENST00000572815 811 ntTSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 FXYD4-204ENST00000616495 778 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 LINC01615-203ENST00000634877 673 ntTSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 STRN-202ENST00000379213 2254 ntTSL 5 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 AL139424.2-202ENST00000641335 1369 ntBASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RIMBP3Q9UFD9 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 RBMXP1-201ENST00000408004 1191 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 HTATIP2-203ENST00000443524 967 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 EEF1GP1-201ENST00000457231 1299 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 FPGT-205ENST00000482102 561 ntTSL 4 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 AC109830.1-203ENST00000506638 467 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 PRDX2P3-201ENST00000515779 586 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 AC017100.1-201ENST00000565978 1169 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 RN7SL5P-201ENST00000581458 321 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 AC136475.7-201ENST00000602949 592 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 RN7SL827P-201ENST00000607480 288 ntBASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 AL590094.1-208ENST00000636917 627 ntTSL 5 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RIMBP3Q9UFD9 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms