Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 GSN-209ENST00000449733 2702 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AL354877.1-201ENST00000424412 413 ntBASIC15.7■□□□□ 0.1
CISHQ9NSE2 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 MTX1P1-201ENST00000440904 838 ntBASIC15.7■□□□□ 0.1
CISHQ9NSE2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 FAM86HP-204ENST00000513466 959 ntBASIC15.7■□□□□ 0.1
CISHQ9NSE2 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AL513477.1-201ENST00000602865 2407 ntBASIC15.7■□□□□ 0.1
CISHQ9NSE2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 AC005089.1-201ENST00000619486 2241 ntBASIC15.7■□□□□ 0.1
CISHQ9NSE2 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
CISHQ9NSE2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
CISHQ9NSE2 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 RDX-218ENST00000544551 4117 ntTSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.69■□□□□ 0.1
CISHQ9NSE2 GOLGA2P4-201ENST00000441462 777 ntBASIC15.69■□□□□ 0.1
CISHQ9NSE2 HSPB1P2-201ENST00000448722 546 ntBASIC15.69■□□□□ 0.1
CISHQ9NSE2 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 MIR6074-201ENST00000612054 107 ntBASIC15.69■□□□□ 0.1
CISHQ9NSE2 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 RN7SL832P-201ENST00000607781 1756 ntBASIC15.69■□□□□ 0.1
CISHQ9NSE2 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
CISHQ9NSE2 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
CISHQ9NSE2 TUBB1P2-201ENST00000422712 1306 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 TUBB1P1-201ENST00000503144 1300 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC090505.1-201ENST00000430515 1834 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC244394.1-201ENST00000435000 1665 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC15.68■□□□□ 0.1
CISHQ9NSE2 SORD2P-201ENST00000558556 1069 ntBASIC15.68■□□□□ 0.1
CISHQ9NSE2 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
CISHQ9NSE2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms