Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC007969.1-201ENST00000433675 447 ntBASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 EIF3FP3-201ENST00000434851 1086 ntBASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 METTL21AP1-201ENST00000438852 635 ntBASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC003102.2-201ENST00000589195 1469 ntBASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
HDHD3Q9BSH5 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC215219.1-201ENST00000400706 1817 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 TEX30-203ENST00000376022 828 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 METTL26-204ENST00000397665 558 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 C1QBPP1-201ENST00000400117 770 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 KLF2P2-201ENST00000416807 1039 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC134915.1-201ENST00000426461 574 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC138761.1-201ENST00000584393 385 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC092364.2-202ENST00000597012 1073 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC004466.1-201ENST00000599515 1080 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC005252.3-201ENST00000623855 2258 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC015688.4-201ENST00000580780 1647 ntBASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
HDHD3Q9BSH5 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 HSPA8P5-201ENST00000456928 2069 ntBASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC12.5□□□□□ -0.41
HDHD3Q9BSH5 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms