Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
NPAS2Q99743 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 FUK-202ENST00000378912 3925 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 PLCD1-204ENST00000463876 2963 ntAPPRIS ALT1 TSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
NPAS2Q99743 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS2Q99743 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 KRT18P43-201ENST00000469825 1281 ntBASIC14.53□□□□□ -0.08
NPAS2Q99743 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 FAM86LP-201ENST00000478302 853 ntBASIC14.53□□□□□ -0.08
NPAS2Q99743 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC011495.1-201ENST00000498085 584 ntBASIC14.53□□□□□ -0.08
NPAS2Q99743 AC104596.2-201ENST00000512793 793 ntBASIC14.53□□□□□ -0.08
NPAS2Q99743 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.53□□□□□ -0.08
NPAS2Q99743 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC14.53□□□□□ -0.08
NPAS2Q99743 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.53□□□□□ -0.08
NPAS2Q99743 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
NPAS2Q99743 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPAS2Q99743 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.52□□□□□ -0.08
NPAS2Q99743 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.52□□□□□ -0.08
NPAS2Q99743 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
NPAS2Q99743 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.52□□□□□ -0.08
NPAS2Q99743 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPAS2Q99743 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPAS2Q99743 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPAS2Q99743 MVK-214ENST00000629016 1591 ntTSL 5 BASIC14.52□□□□□ -0.08
NPAS2Q99743 AMT-232ENST00000636199 1546 ntTSL 5 BASIC14.52□□□□□ -0.08
NPAS2Q99743 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
NPAS2Q99743 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
NPAS2Q99743 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 NSL1-201ENST00000366976 722 ntTSL 2 BASIC14.52□□□□□ -0.09
NPAS2Q99743 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
NPAS2Q99743 AC079776.1-201ENST00000401540 1152 ntBASIC14.52□□□□□ -0.09
NPAS2Q99743 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.52□□□□□ -0.09
NPAS2Q99743 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.52□□□□□ -0.09
NPAS2Q99743 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC14.52□□□□□ -0.09
NPAS2Q99743 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.52□□□□□ -0.09
NPAS2Q99743 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC14.52□□□□□ -0.09
NPAS2Q99743 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC14.52□□□□□ -0.09
NPAS2Q99743 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC14.52□□□□□ -0.09
NPAS2Q99743 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
NPAS2Q99743 BRI3BPP1-201ENST00000594224 787 ntBASIC14.52□□□□□ -0.09
NPAS2Q99743 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.52□□□□□ -0.09
NPAS2Q99743 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.52□□□□□ -0.09
NPAS2Q99743 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 AL033527.5-201ENST00000641382 801 ntBASIC14.52□□□□□ -0.09
NPAS2Q99743 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
NPAS2Q99743 AGGF1P1-201ENST00000509500 2073 ntBASIC14.52□□□□□ -0.09
NPAS2Q99743 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC14.52□□□□□ -0.09
NPAS2Q99743 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC14.52□□□□□ -0.09
NPAS2Q99743 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms