Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
DDX11Q96FC9 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
DDX11Q96FC9 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AC055811.4-201ENST00000624039 1754 ntBASIC17.59■□□□□ 0.41
DDX11Q96FC9 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 NIN-202ENST00000324330 4364 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AC006033.1-201ENST00000440505 426 ntBASIC17.59■□□□□ 0.41
DDX11Q96FC9 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
DDX11Q96FC9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC17.59■□□□□ 0.41
DDX11Q96FC9 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.58■□□□□ 0.41
DDX11Q96FC9 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.41
DDX11Q96FC9 KCP-203ENST00000610776 5108 ntTSL 5 BASIC17.58■□□□□ 0.41
DDX11Q96FC9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
DDX11Q96FC9 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 CD8B2-202ENST00000417670 633 ntBASIC17.58■□□□□ 0.4
DDX11Q96FC9 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 HOMER2P2-201ENST00000451621 847 ntBASIC17.58■□□□□ 0.4
DDX11Q96FC9 AC104306.2-201ENST00000451877 341 ntBASIC17.58■□□□□ 0.4
DDX11Q96FC9 KRT8P13-201ENST00000463294 1010 ntBASIC17.58■□□□□ 0.4
DDX11Q96FC9 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 C2orf69P2-201ENST00000562032 1123 ntBASIC17.58■□□□□ 0.4
DDX11Q96FC9 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
DDX11Q96FC9 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.58■□□□□ 0.4
DDX11Q96FC9 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 AL354989.2-201ENST00000435838 1540 ntBASIC17.57■□□□□ 0.4
DDX11Q96FC9 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC17.57■□□□□ 0.4
DDX11Q96FC9 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
DDX11Q96FC9 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms