Protein–RNA interactions for Protein: Q969W0

SPTSSA, Serine palmitoyltransferase small subunit A, humanhuman

Predictions only

Length 71 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSAQ969W0 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AC138761.1-201ENST00000584393 385 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AC132938.4-201ENST00000623835 848 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 AC015688.4-201ENST00000580780 1647 ntBASIC12.97□□□□□ -0.33
SPTSSAQ969W0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.97□□□□□ -0.33
SPTSSAQ969W0 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 HSPA7-201ENST00000445535 1927 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 GUK1-206ENST00000366723 845 ntTSL 5 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 AC005229.1-201ENST00000392885 409 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 POM121L8P-201ENST00000417732 1281 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 RPL28-204ENST00000431533 590 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 POM121L9P-203ENST00000441984 1285 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 MYADML-201ENST00000474610 2147 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 AC011840.2-201ENST00000563063 1520 ntBASIC12.96□□□□□ -0.33
SPTSSAQ969W0 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.96□□□□□ -0.33
SPTSSAQ969W0 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 AC152010.1-201ENST00000415779 2006 ntBASIC12.96□□□□□ -0.34
SPTSSAQ969W0 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 AL138709.1-201ENST00000614840 1693 ntBASIC12.96□□□□□ -0.34
SPTSSAQ969W0 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC12.96□□□□□ -0.34
SPTSSAQ969W0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 RET-205ENST00000615310 4337 ntTSL 5 BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SPTSSAQ969W0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms