Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 PTPA-215ENST00000432124 567 ntTSL 4 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 UPF3AP2-201ENST00000457924 1132 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC105129.2-201ENST00000559536 390 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 MIR4706-201ENST00000582134 82 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC026740.1-201ENST00000607068 791 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 FAS-202ENST00000352159 1722 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 AC138969.2-201ENST00000532739 9932 ntBASIC14.99□□□□□ -0.01
SHROOM3Q8TF72 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 STRADA-221ENST00000582137 1238 ntTSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AC009955.4-201ENST00000597192 544 ntBASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 U62317.3-201ENST00000608319 855 ntBASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AL136301.1-201ENST00000615830 422 ntBASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AL591623.1-201ENST00000417786 1960 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
SHROOM3Q8TF72 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC14.97□□□□□ -0.01
SHROOM3Q8TF72 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms