Protein–RNA interactions for Protein: Q8TC90

CCER1, Coiled-coil domain-containing glutamate-rich protein 1, humanhuman

Predicted RBP Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCER1Q8TC90 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC015688.4-201ENST00000580780 1647 ntBASIC22.11■■□□□ 1.13
CCER1Q8TC90 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 SOCS2P1-201ENST00000417727 557 ntBASIC22.11■■□□□ 1.13
CCER1Q8TC90 AL442647.2-201ENST00000429864 857 ntBASIC22.11■■□□□ 1.13
CCER1Q8TC90 GALT-202ENST00000450095 1280 ntTSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC093004.1-201ENST00000508850 424 ntBASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 HNRNPA1P13-201ENST00000510646 963 ntBASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
CCER1Q8TC90 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CCER1Q8TC90 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC093726.1-201ENST00000608064 963 ntBASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC099568.2-201ENST00000609194 695 ntBASIC22.1■■□□□ 1.13
CCER1Q8TC90 AC005252.2-201ENST00000624630 1141 ntBASIC22.1■■□□□ 1.13
CCER1Q8TC90 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC22.1■■□□□ 1.13
CCER1Q8TC90 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
CCER1Q8TC90 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 KRT8P24-201ENST00000560290 1559 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 B9D1-203ENST00000395615 805 ntTSL 3 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 TLE1P1-201ENST00000422965 589 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 UGT1A2P-201ENST00000454886 866 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 FO681548.1-201ENST00000455617 1132 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 AC123567.1-201ENST00000548294 1261 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 AC107918.4-201ENST00000641966 3141 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC22.09■■□□□ 1.13
CCER1Q8TC90 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 CICP17-201ENST00000418553 2377 ntBASIC22.09■■□□□ 1.13
CCER1Q8TC90 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CCER1Q8TC90 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCER1Q8TC90 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC22.08■■□□□ 1.13
CCER1Q8TC90 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CCER1Q8TC90 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CCER1Q8TC90 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
CCER1Q8TC90 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC22.08■■□□□ 1.13
CCER1Q8TC90 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms