Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRTM1Q86UE6 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.87□□□□□ -0.35
LRRTM1Q86UE6 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRTM1Q86UE6 TOLLIP-202ENST00000317204 3617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LRRTM1Q86UE6 MRPL37P1-201ENST00000592451 1337 ntBASIC12.87□□□□□ -0.35
LRRTM1Q86UE6 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC015909.5-201ENST00000624336 2266 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 KRT18P13-201ENST00000400056 1290 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC211486.1-202ENST00000416371 468 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC254562.1-201ENST00000417586 456 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 CNN2P2-201ENST00000443536 909 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 CNN2P3-201ENST00000450201 906 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC125807.1-201ENST00000483097 614 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC211476.1-201ENST00000503899 468 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SPDYE18-201ENST00000510091 1050 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC138761.1-201ENST00000584393 385 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC093813.1-201ENST00000605066 256 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AL136317.3-201ENST00000618497 906 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 BX539320.1-201ENST00000623759 877 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AGAP10P-201ENST00000454844 2418 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 AC020658.7-201ENST00000624274 2442 ntBASIC12.86□□□□□ -0.35
LRRTM1Q86UE6 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AL591122.2-201ENST00000624125 1853 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 AC004945.1-201ENST00000416738 983 ntBASIC12.85□□□□□ -0.35
LRRTM1Q86UE6 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms