Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 AC015688.4-201ENST00000580780 1647 ntBASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC10.14□□□□□ -0.79
LINC00242Q5T6M2 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 DISC1-222ENST00000622252 6927 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AL139400.1-201ENST00000366220 510 ntBASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AL139094.1-201ENST00000405549 1188 ntBASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC114501.2-201ENST00000439631 535 ntBASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 LY6E-204ENST00000519546 971 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 METTL23-205ENST00000588302 925 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AL391069.4-201ENST00000609583 481 ntBASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 FOS-202ENST00000535987 1402 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 SLC6A6P1-201ENST00000413933 1850 ntBASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC10.13□□□□□ -0.79
LINC00242Q5T6M2 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC10.13□□□□□ -0.79
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms