Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 WARS-203ENST00000358655 2466 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 FGFRL1-201ENST00000264748 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 HNRNPA1P28-201ENST00000424481 961 ntBASIC11.75□□□□□ -0.53
CDC34P49427 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC34P49427 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC34P49427 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC11.75□□□□□ -0.53
CDC34P49427 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC34P49427 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 AL445228.2-201ENST00000605589 952 ntBASIC11.75□□□□□ -0.53
CDC34P49427 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC11.75□□□□□ -0.53
CDC34P49427 AC055717.3-201ENST00000622967 595 ntBASIC11.75□□□□□ -0.53
CDC34P49427 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC11.75□□□□□ -0.53
CDC34P49427 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CDC34P49427 AC104109.2-201ENST00000602919 1418 ntBASIC11.75□□□□□ -0.53
CDC34P49427 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 Z97205.2-201ENST00000564697 1639 ntBASIC11.75□□□□□ -0.53
CDC34P49427 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC11.75□□□□□ -0.53
CDC34P49427 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 F2RL3-201ENST00000248076 3473 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CDC34P49427 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 FFAR4-202ENST00000371483 3653 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CDC34P49427 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 FAM58CP-201ENST00000435741 640 ntBASIC11.74□□□□□ -0.53
CDC34P49427 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC11.74□□□□□ -0.53
CDC34P49427 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC11.74□□□□□ -0.53
CDC34P49427 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 KRT8P48-201ENST00000515599 1220 ntBASIC11.74□□□□□ -0.53
CDC34P49427 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC11.74□□□□□ -0.53
CDC34P49427 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 MIR6069-201ENST00000620069 79 ntBASIC11.74□□□□□ -0.53
CDC34P49427 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC11.74□□□□□ -0.53
CDC34P49427 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 AC114271.1-201ENST00000612689 2813 ntBASIC11.74□□□□□ -0.53
CDC34P49427 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 AC011840.2-201ENST00000563063 1520 ntBASIC11.74□□□□□ -0.53
CDC34P49427 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
CDC34P49427 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 TP73-207ENST00000378290 1831 ntTSL 2 BASIC11.74□□□□□ -0.53
CDC34P49427 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
CDC34P49427 USP24-201ENST00000294383 10549 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms