Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 AC098831.1-202ENST00000438821 336 ntBASIC14.87□□□□□ -0.03
LSP1P33241 AC112191.1-201ENST00000523689 701 ntBASIC14.87□□□□□ -0.03
LSP1P33241 AC120114.3-201ENST00000611923 658 ntBASIC14.87□□□□□ -0.03
LSP1P33241 AC116407.3-201ENST00000623905 1129 ntBASIC14.87□□□□□ -0.03
LSP1P33241 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
LSP1P33241 KIAA1191-202ENST00000393725 2700 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 AC106818.1-201ENST00000623223 3242 ntBASIC14.87□□□□□ -0.03
LSP1P33241 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LSP1P33241 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC14.87□□□□□ -0.03
LSP1P33241 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
LSP1P33241 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 ZNF259P1-201ENST00000407656 1365 ntBASIC14.86□□□□□ -0.03
LSP1P33241 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 KRT18P43-201ENST00000469825 1281 ntBASIC14.86□□□□□ -0.03
LSP1P33241 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.86□□□□□ -0.03
LSP1P33241 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.86□□□□□ -0.03
LSP1P33241 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC14.86□□□□□ -0.03
LSP1P33241 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 AC092364.2-202ENST00000597012 1073 ntBASIC14.86□□□□□ -0.03
LSP1P33241 HFE2-206ENST00000634927 506 ntTSL 4 BASIC14.86□□□□□ -0.03
LSP1P33241 CELF1-201ENST00000310513 4583 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC14.86□□□□□ -0.03
LSP1P33241 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
LSP1P33241 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
LSP1P33241 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
LSP1P33241 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
LSP1P33241 HLA-K-203ENST00000430151 1046 ntBASIC14.85□□□□□ -0.03
LSP1P33241 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.85□□□□□ -0.03
LSP1P33241 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.85□□□□□ -0.03
LSP1P33241 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.85□□□□□ -0.03
LSP1P33241 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.85□□□□□ -0.03
LSP1P33241 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.85□□□□□ -0.03
LSP1P33241 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
LSP1P33241 AC034105.1-201ENST00000563488 319 ntBASIC14.85□□□□□ -0.03
LSP1P33241 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.85□□□□□ -0.03
LSP1P33241 BX640515.1-201ENST00000617215 977 ntBASIC14.85□□□□□ -0.03
LSP1P33241 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms