Protein–RNA interactions for Protein: P21757

MSR1, Macrophage scavenger receptor types I and II, humanhuman

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1P21757 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC13.1□□□□□ -0.31
MSR1P21757 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
MSR1P21757 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
MSR1P21757 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.09□□□□□ -0.31
MSR1P21757 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC13.09□□□□□ -0.31
MSR1P21757 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
MSR1P21757 AC092933.1-201ENST00000393644 945 ntBASIC13.09□□□□□ -0.31
MSR1P21757 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 RNA5SP486-201ENST00000515961 83 ntBASIC13.09□□□□□ -0.31
MSR1P21757 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.09□□□□□ -0.31
MSR1P21757 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC13.09□□□□□ -0.31
MSR1P21757 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 AC132938.2-201ENST00000579188 680 ntBASIC13.09□□□□□ -0.31
MSR1P21757 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC13.09□□□□□ -0.31
MSR1P21757 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.09□□□□□ -0.31
MSR1P21757 ECM1P1-201ENST00000604092 1279 ntBASIC13.09□□□□□ -0.31
MSR1P21757 SRP9-204ENST00000619790 377 ntTSL 2 BASIC13.09□□□□□ -0.31
MSR1P21757 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 AL591163.1-201ENST00000641757 987 ntBASIC13.09□□□□□ -0.31
MSR1P21757 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.09□□□□□ -0.31
MSR1P21757 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
MSR1P21757 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
MSR1P21757 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.31
MSR1P21757 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC13.08□□□□□ -0.32
MSR1P21757 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 COL6A3-206ENST00000409809 8916 ntTSL 5 BASIC13.08□□□□□ -0.32
MSR1P21757 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
MSR1P21757 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
MSR1P21757 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 AP000593.2-201ENST00000542775 1433 ntBASIC13.08□□□□□ -0.32
MSR1P21757 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.08□□□□□ -0.32
MSR1P21757 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 DBNDD2-201ENST00000357275 1036 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
MSR1P21757 EDF1-203ENST00000371649 790 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MSR1P21757 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC13.08□□□□□ -0.32
MSR1P21757 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.08□□□□□ -0.32
MSR1P21757 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 BTNL10-201ENST00000595971 695 ntBASIC13.08□□□□□ -0.32
MSR1P21757 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
MSR1P21757 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.08□□□□□ -0.32
MSR1P21757 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC13.08□□□□□ -0.32
MSR1P21757 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
MSR1P21757 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC13.08□□□□□ -0.32
MSR1P21757 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms