Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 SALL4P5-201ENST00000419001 1760 ntBASIC13.04□□□□□ -0.32
UBCP0CG48 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
UBCP0CG48 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
UBCP0CG48 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
UBCP0CG48 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
UBCP0CG48 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 STAB1-201ENST00000321725 7928 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 C1QBPP1-201ENST00000400117 770 ntBASIC13.03□□□□□ -0.32
UBCP0CG48 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.03□□□□□ -0.32
UBCP0CG48 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC13.03□□□□□ -0.32
UBCP0CG48 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.03□□□□□ -0.32
UBCP0CG48 AC104596.2-201ENST00000512793 793 ntBASIC13.03□□□□□ -0.32
UBCP0CG48 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.03□□□□□ -0.32
UBCP0CG48 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.03□□□□□ -0.32
UBCP0CG48 AC090505.1-201ENST00000430515 1834 ntBASIC13.03□□□□□ -0.32
UBCP0CG48 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC13.03□□□□□ -0.32
UBCP0CG48 AC016397.2-201ENST00000624848 1985 ntBASIC13.03□□□□□ -0.32
UBCP0CG48 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.03□□□□□ -0.32
UBCP0CG48 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
UBCP0CG48 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBCP0CG48 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBCP0CG48 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.02□□□□□ -0.32
UBCP0CG48 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBCP0CG48 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
UBCP0CG48 INE2-201ENST00000630399 1874 ntBASIC13.02□□□□□ -0.32
UBCP0CG48 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.02□□□□□ -0.33
UBCP0CG48 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.02□□□□□ -0.33
UBCP0CG48 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 RNU1-114P-201ENST00000365297 166 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.02□□□□□ -0.33
UBCP0CG48 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
UBCP0CG48 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
UBCP0CG48 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.02□□□□□ -0.33
UBCP0CG48 GIMAP3P-201ENST00000495150 836 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 AC026434.2-201ENST00000506094 1078 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC13.02□□□□□ -0.33
UBCP0CG48 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
UBCP0CG48 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC13.02□□□□□ -0.33
UBCP0CG48 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC13.02□□□□□ -0.33
UBCP0CG48 AP001582.1-201ENST00000525856 295 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 AC055876.2-201ENST00000531834 546 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.02□□□□□ -0.33
UBCP0CG48 SPDYE22P-201ENST00000582158 798 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 AC099568.2-201ENST00000609194 695 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 MIR6074-201ENST00000612054 107 ntBASIC13.02□□□□□ -0.33
UBCP0CG48 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
UBCP0CG48 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC13.02□□□□□ -0.33
UBCP0CG48 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
UBCP0CG48 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 294 ms