Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.35□□□□□ -0.11
TNFP01375 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
TNFP01375 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
TNFP01375 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
TNFP01375 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFP01375 XBP1P1-201ENST00000436573 652 ntBASIC14.35□□□□□ -0.11
TNFP01375 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFP01375 PFN2-206ENST00000461930 606 ntTSL 4 BASIC14.35□□□□□ -0.11
TNFP01375 IGHVIII-5-2-201ENST00000522505 261 ntBASIC14.35□□□□□ -0.11
TNFP01375 TP53AIP1-204ENST00000530777 363 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC14.35□□□□□ -0.11
TNFP01375 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
TNFP01375 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFP01375 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC14.35□□□□□ -0.11
TNFP01375 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFP01375 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC14.35□□□□□ -0.11
TNFP01375 AL157813.1-201ENST00000612996 587 ntBASIC14.35□□□□□ -0.11
TNFP01375 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC14.35□□□□□ -0.11
TNFP01375 AL353770.1-201ENST00000614915 403 ntBASIC14.35□□□□□ -0.11
TNFP01375 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC14.35□□□□□ -0.11
TNFP01375 AC092299.1-201ENST00000632679 757 ntBASIC14.35□□□□□ -0.11
TNFP01375 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 AC126177.1-201ENST00000547829 2218 ntBASIC14.35□□□□□ -0.11
TNFP01375 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC14.35□□□□□ -0.11
TNFP01375 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC14.35□□□□□ -0.11
TNFP01375 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
TNFP01375 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 AHCYP4-201ENST00000419201 1315 ntBASIC14.35□□□□□ -0.11
TNFP01375 SYNGR1-203ENST00000328933 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
TNFP01375 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFP01375 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
TNFP01375 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 AJ011931.1-201ENST00000618749 2492 ntBASIC14.34□□□□□ -0.11
TNFP01375 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFP01375 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFP01375 MAGEA5-201ENST00000446757 942 ntBASIC14.34□□□□□ -0.11
TNFP01375 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC14.34□□□□□ -0.11
TNFP01375 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC14.34□□□□□ -0.11
TNFP01375 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC14.34□□□□□ -0.11
TNFP01375 MIR3907-201ENST00000579424 151 ntBASIC14.34□□□□□ -0.11
TNFP01375 AC016629.1-201ENST00000596579 586 ntBASIC14.34□□□□□ -0.11
TNFP01375 AL353726.2-201ENST00000623259 884 ntBASIC14.34□□□□□ -0.11
TNFP01375 AC079336.7-201ENST00000623428 1078 ntBASIC14.34□□□□□ -0.11
TNFP01375 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.34□□□□□ -0.11
TNFP01375 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
TNFP01375 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TNFP01375 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms