Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
ALDH1A1P00352 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
ALDH1A1P00352 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AC010491.1-201ENST00000563101 2797 ntBASIC16.52■□□□□ 0.24
ALDH1A1P00352 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 UBOX5-AS1-201ENST00000446537 1792 ntTSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 TEX33-201ENST00000381821 978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AC004895.1-203ENST00000428901 540 ntTSL 4 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AL512599.1-201ENST00000430724 685 ntBASIC16.52■□□□□ 0.24
ALDH1A1P00352 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 MED11-202ENST00000573708 802 ntTSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC16.52■□□□□ 0.24
ALDH1A1P00352 AC011462.4-201ENST00000616866 449 ntBASIC16.52■□□□□ 0.24
ALDH1A1P00352 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.52■□□□□ 0.24
ALDH1A1P00352 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ALDH1A1P00352 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
ALDH1A1P00352 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ALDH1A1P00352 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.52■□□□□ 0.23
ALDH1A1P00352 LINC01101-201ENST00000622953 1884 ntBASIC16.52■□□□□ 0.23
ALDH1A1P00352 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
ALDH1A1P00352 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALDH1A1P00352 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALDH1A1P00352 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ALDH1A1P00352 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 PCDHA14-201ENST00000506751 2298 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AC117945.1-201ENST00000451375 463 ntTSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 CHCHD2P2-201ENST00000503744 321 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 KLF3-AS1-203ENST00000504219 627 ntTSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 BCRP4-201ENST00000506079 804 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 AC095040.1-201ENST00000513286 675 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 AC092612.1-201ENST00000514501 998 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ALDH1A1P00352 F11R-204ENST00000537746 1245 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 NAA40-205ENST00000539656 577 ntTSL 4 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 CES1P2-201ENST00000566467 1242 ntBASIC16.51■□□□□ 0.23
ALDH1A1P00352 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 DNAJC10-211ENST00000640034 888 ntTSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.51■□□□□ 0.23
ALDH1A1P00352 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms