Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDRT1O95170 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 AC118758.2-201ENST00000614242 2813 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 KRT18P64-201ENST00000434946 1219 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 DNAJB3-201ENST00000446806 729 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC13.25□□□□□ -0.29
CDRT1O95170 AL079307.3-201ENST00000556114 283 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC13.25□□□□□ -0.29
CDRT1O95170 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.25□□□□□ -0.29
CDRT1O95170 AL671883.3-201ENST00000603274 991 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 AL118506.1-201ENST00000601296 3082 ntBASIC13.25□□□□□ -0.29
CDRT1O95170 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
CDRT1O95170 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC13.25□□□□□ -0.29
CDRT1O95170 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 ATG9B-203ENST00000469530 3489 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
CDRT1O95170 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CDRT1O95170 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 PPFIA4-202ENST00000295706 6395 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.24□□□□□ -0.29
CDRT1O95170 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 YBX1P5-201ENST00000509441 847 ntBASIC13.24□□□□□ -0.29
CDRT1O95170 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.24□□□□□ -0.29
CDRT1O95170 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.24□□□□□ -0.29
CDRT1O95170 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC13.24□□□□□ -0.29
CDRT1O95170 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC004835.2-201ENST00000603762 682 ntBASIC13.24□□□□□ -0.29
CDRT1O95170 AL589739.1-201ENST00000607720 493 ntBASIC13.24□□□□□ -0.29
CDRT1O95170 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC13.24□□□□□ -0.29
CDRT1O95170 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CDRT1O95170 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CDRT1O95170 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
CDRT1O95170 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.24□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms