Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 HNRNPA3P6-201ENST00000472163 1006 ntBASIC6.36□□□□□ -1.39
USH2AO75445 BACE1-207ENST00000510630 1236 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 AC026150.1-201ENST00000562992 701 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 CD276-217ENST00000564751 951 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
USH2AO75445 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 IP6K2-211ENST00000432678 1309 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 METTL22-203ENST00000561758 1312 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC6.36□□□□□ -1.39
USH2AO75445 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 AC103702.1-201ENST00000548801 2630 ntBASIC6.36□□□□□ -1.39
USH2AO75445 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 PPP1R2P4-201ENST00000424051 595 ntBASIC6.36□□□□□ -1.39
USH2AO75445 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 RN7SL794P-201ENST00000469816 280 ntBASIC6.36□□□□□ -1.39
USH2AO75445 CSRP2-207ENST00000552330 910 ntTSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 AC145285.5-201ENST00000562217 361 ntBASIC6.36□□□□□ -1.39
USH2AO75445 MIR1587-201ENST00000583319 53 ntBASIC6.36□□□□□ -1.39
USH2AO75445 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 AL035427.1-201ENST00000602441 387 ntTSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 URAHP-205ENST00000610227 398 ntBASIC6.36□□□□□ -1.39
USH2AO75445 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC6.36□□□□□ -1.39
USH2AO75445 IQCF4-203ENST00000428561 420 ntBASIC6.36□□□□□ -1.39
USH2AO75445 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC6.36□□□□□ -1.39
USH2AO75445 ALG10-202ENST00000538927 571 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 AP000439.2-201ENST00000542064 726 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 BX088702.1-201ENST00000610784 235 ntBASIC6.36□□□□□ -1.39
USH2AO75445 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
USH2AO75445 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
USH2AO75445 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 PHBP3-201ENST00000412562 819 ntBASIC6.36□□□□□ -1.39
USH2AO75445 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC6.36□□□□□ -1.39
USH2AO75445 AC012513.2-201ENST00000441511 1137 ntBASIC6.36□□□□□ -1.39
USH2AO75445 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 TATDN3-208ENST00000526997 794 ntTSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 TATDN3-213ENST00000531963 1291 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 AL359219.1-201ENST00000556311 934 ntBASIC6.36□□□□□ -1.39
USH2AO75445 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC6.36□□□□□ -1.39
USH2AO75445 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 DEDD-202ENST00000368006 2345 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC6.36□□□□□ -1.39
USH2AO75445 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
USH2AO75445 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC6.36□□□□□ -1.39
USH2AO75445 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms