Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.61■□□□□ 0.25
CHMP2AO43633 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CHMP2AO43633 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 NIN-202ENST00000324330 4364 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 AC244394.1-201ENST00000435000 1665 ntBASIC16.6■□□□□ 0.25
CHMP2AO43633 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP2AO43633 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 KLF2P1-201ENST00000447438 1042 ntBASIC16.6■□□□□ 0.25
CHMP2AO43633 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP2AO43633 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP2AO43633 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC16.6■□□□□ 0.25
CHMP2AO43633 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC16.6■□□□□ 0.25
CHMP2AO43633 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 AC244093.1-201ENST00000610837 814 ntBASIC16.6■□□□□ 0.25
CHMP2AO43633 AC027601.3-201ENST00000622907 509 ntBASIC16.6■□□□□ 0.25
CHMP2AO43633 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
CHMP2AO43633 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHMP2AO43633 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC16.6■□□□□ 0.25
CHMP2AO43633 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHMP2AO43633 AC015688.4-201ENST00000580780 1647 ntBASIC16.59■□□□□ 0.25
CHMP2AO43633 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 SMS-201ENST00000379404 1174 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP2AO43633 SKA2-202ENST00000437036 625 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.59■□□□□ 0.25
CHMP2AO43633 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 NAT9-222ENST00000583476 583 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP2AO43633 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.59■□□□□ 0.25
CHMP2AO43633 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.59■□□□□ 0.25
CHMP2AO43633 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 KRT8P29-201ENST00000420409 1371 ntBASIC16.59■□□□□ 0.25
CHMP2AO43633 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
CHMP2AO43633 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
CHMP2AO43633 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHMP2AO43633 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms