Protein–RNA interactions for Protein: A7E2U8

C4orf47, UPF0602 protein C4orf47, humanhuman

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf47A7E2U8 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AC012158.2-201ENST00000536546 354 ntBASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 DGAT2L7P-201ENST00000602462 744 ntBASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AC244250.3-201ENST00000620749 366 ntBASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AC138466.5-201ENST00000624002 808 ntBASIC14.37□□□□□ -0.11
C4orf47A7E2U8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
C4orf47A7E2U8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 KRT8P31-201ENST00000504812 1408 ntBASIC14.36□□□□□ -0.11
C4orf47A7E2U8 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AL645933.1-201ENST00000440087 609 ntBASIC14.36□□□□□ -0.11
C4orf47A7E2U8 LINC00634-202ENST00000505157 222 ntBASIC14.36□□□□□ -0.11
C4orf47A7E2U8 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AC114947.1-202ENST00000514136 344 ntBASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AP000911.2-201ENST00000534330 502 ntBASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 DBP-202ENST00000593500 712 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.36□□□□□ -0.11
C4orf47A7E2U8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.35□□□□□ -0.11
C4orf47A7E2U8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.35□□□□□ -0.11
C4orf47A7E2U8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms