Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RCL1Q9Y2P8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RCL1Q9Y2P8 PLA2G4F-202ENST00000397272 5587 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RCL1Q9Y2P8 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 C2-206ENST00000442278 2434 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TOMM22P5-201ENST00000416399 439 ntBASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 HLA-K-203ENST00000430151 1046 ntBASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 RNA5SP416-201ENST00000516838 111 ntBASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 LINC01115-203ENST00000606068 577 ntBASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 MIR6069-201ENST00000620069 79 ntBASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 PASK-204ENST00000405260 4942 ntAPPRIS P3 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
RCL1Q9Y2P8 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.15□□□□□ -0.47
RCL1Q9Y2P8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 KRT8P14-201ENST00000414254 1442 ntBASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AC016245.1-201ENST00000570335 3204 ntTSL 2 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 KRT18P56-201ENST00000507275 550 ntBASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC12.14□□□□□ -0.47
RCL1Q9Y2P8 AC026150.2-201ENST00000564693 1156 ntBASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms