Protein–RNA interactions for Protein: Q9Y2E6

DTX4, E3 ubiquitin-protein ligase DTX4, humanhuman

Predictions only

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX4Q9Y2E6 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AC000032.1-201ENST00000562538 491 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AL033527.4-201ENST00000641026 673 ntBASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AC117489.1-201ENST00000625169 3217 ntBASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 KRT8P28-201ENST00000433288 1390 ntBASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DTX4Q9Y2E6 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC015802.1-201ENST00000588104 1449 ntBASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 LAMA4-203ENST00000368638 1061 ntTSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 RPS2P32-201ENST00000439199 892 ntBASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 FAM86HP-204ENST00000513466 959 ntBASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 RN7SL560P-201ENST00000577943 264 ntBASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
DTX4Q9Y2E6 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 GRK6P1-201ENST00000400595 1711 ntBASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
DTX4Q9Y2E6 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms