Protein–RNA interactions for Protein: Q9HCJ6

VAT1L, Synaptic vesicle membrane protein VAT-1 homolog-like, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1LQ9HCJ6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 AC244394.1-201ENST00000435000 1665 ntBASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.13■□□□□ 0.33
VAT1LQ9HCJ6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 MX1-218ENST00000619682 1980 ntTSL 5 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 NKAIN1P1-201ENST00000435754 582 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AC044849.1-201ENST00000519737 1188 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AC126915.1-201ENST00000522847 1038 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AC008825.2-201ENST00000603374 718 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 AC006504.5-208ENST00000588784 2401 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 KRT8P29-201ENST00000420409 1371 ntBASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
VAT1LQ9HCJ6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AC106881.1-201ENST00000605849 3329 ntBASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AC104073.2-201ENST00000453737 312 ntBASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 KRT8P13-201ENST00000463294 1010 ntBASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
VAT1LQ9HCJ6 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 FNTAP2-201ENST00000430308 634 ntBASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.1■□□□□ 0.33
VAT1LQ9HCJ6 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms