Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AL589987.1-201ENST00000453380 819 ntBASIC14.44□□□□□ -0.1
EBF4Q9BQW3 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AL596442.2-201ENST00000610240 980 ntBASIC14.44□□□□□ -0.1
EBF4Q9BQW3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AC073592.8-201ENST00000624126 511 ntBASIC14.44□□□□□ -0.1
EBF4Q9BQW3 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 INTS5-201ENST00000330574 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 GPR4-201ENST00000323040 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC14.44□□□□□ -0.1
EBF4Q9BQW3 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 GOSR2-235ENST00000640269 2190 ntTSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 DNAJB3-201ENST00000446806 729 ntBASIC14.43□□□□□ -0.1
EBF4Q9BQW3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 PRSS30P-206ENST00000641773 873 ntBASIC14.43□□□□□ -0.1
EBF4Q9BQW3 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 AC087386.2-201ENST00000623212 4637 ntBASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC14.43□□□□□ -0.1
EBF4Q9BQW3 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC087499.5-201ENST00000452760 1342 ntBASIC14.42□□□□□ -0.1
EBF4Q9BQW3 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 NOTCH4-201ENST00000375023 6745 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC114501.2-201ENST00000439631 535 ntBASIC14.42□□□□□ -0.1
EBF4Q9BQW3 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 MEIS3P1-201ENST00000495167 958 ntBASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.42□□□□□ -0.1
EBF4Q9BQW3 AC138761.1-201ENST00000584393 385 ntBASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 167.7 ms