Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 BX640514.1-201ENST00000583223 1918 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
VRK1Q99986 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.18□□□□□ -0.3
VRK1Q99986 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 AC012441.1-201ENST00000446669 685 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.18□□□□□ -0.3
VRK1Q99986 KRT18P25-201ENST00000508931 1278 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.18□□□□□ -0.3
VRK1Q99986 MIR4259-201ENST00000584466 101 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 MSTO2P-201ENST00000314835 1709 ntBASIC13.18□□□□□ -0.3
VRK1Q99986 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
VRK1Q99986 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
VRK1Q99986 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.18□□□□□ -0.3
VRK1Q99986 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
VRK1Q99986 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 TKT-202ENST00000423516 2075 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 MBLAC2-202ENST00000514906 1936 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 C2orf27AP3-201ENST00000434123 579 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 AC016694.1-201ENST00000434179 700 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 AC007551.1-201ENST00000457394 519 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 AL354718.3-201ENST00000616414 581 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.17□□□□□ -0.3
VRK1Q99986 CR382287.1-201ENST00000623954 586 ntBASIC13.17□□□□□ -0.3
VRK1Q99986 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms