Protein–RNA interactions for Protein: Q96DZ5

CLIP3, CAP-Gly domain-containing linker protein 3, humanhuman

Predictions only

Length 547 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP3Q96DZ5 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 FAM86HP-204ENST00000513466 959 ntBASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AL603764.1-201ENST00000636452 321 ntBASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CLIP3Q96DZ5 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
CLIP3Q96DZ5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC006058.4-201ENST00000624016 1670 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC067750.1-201ENST00000608826 6545 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC027601.5-201ENST00000624065 2482 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 KRT8P44-201ENST00000441609 1350 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AP006547.1-201ENST00000563435 692 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AL118558.3-201ENST00000607414 1079 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CLIP3Q96DZ5 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 63.4 ms