Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AL121723.1-201ENST00000445194 1519 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 API5-202ENST00000420461 2009 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC018892.3-201ENST00000623986 2499 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 LINC01101-201ENST00000622953 1884 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MIR648-201ENST00000385046 94 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC005229.1-201ENST00000392885 409 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC009486.1-201ENST00000569860 813 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 INTS4P1-203ENST00000641008 3683 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 EEF2K-201ENST00000263026 7388 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 TNN-202ENST00000621086 4234 ntTSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 MAP7D3-201ENST00000316077 4567 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 USO1-201ENST00000264904 4135 ntTSL 2 BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
SCXQ7RTU7 DKFZP434H168-201ENST00000567381 1905 ntBASIC9.92□□□□□ -0.82
SCXQ7RTU7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
SCXQ7RTU7 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 AC005252.3-201ENST00000623855 2258 ntBASIC9.91□□□□□ -0.82
SCXQ7RTU7 BMF-201ENST00000354670 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC9.91□□□□□ -0.82
SCXQ7RTU7 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC9.91□□□□□ -0.82
SCXQ7RTU7 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
SCXQ7RTU7 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms