Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 CDC20-201ENST00000310955 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 CPA5-208ENST00000485477 2573 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 CCDC14-220ENST00000488653 4156 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 RAB10-201ENST00000264710 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 SOGA1-201ENST00000237536 14371 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 MRVI1-209ENST00000531107 2887 ntAPPRIS P3 TSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 AC022364.1-202ENST00000617468 2409 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 BAALC-201ENST00000297574 801 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX2-5P52952 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 PTCHD3P3-201ENST00000403073 906 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC12.55□□□□□ -0.4
NKX2-5P52952 AL441883.1-201ENST00000566170 1045 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 AC140113.3-201ENST00000605663 199 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 AL031055.1-201ENST00000606362 631 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
NKX2-5P52952 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 FAM71E2-201ENST00000424985 3191 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 PLA2G15-201ENST00000219345 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 TTYH3-204ENST00000407643 4537 ntTSL 5 BASIC12.55□□□□□ -0.4
NKX2-5P52952 DUOX2-201ENST00000389039 6533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 EPB42-202ENST00000441366 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 MYADML-201ENST00000474610 2147 ntBASIC12.55□□□□□ -0.4
NKX2-5P52952 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC12.55□□□□□ -0.4
NKX2-5P52952 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
NKX2-5P52952 PKP4P1-201ENST00000426801 2158 ntBASIC12.54□□□□□ -0.4
NKX2-5P52952 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 PITRM1-201ENST00000224949 3450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 ARHGAP33-203ENST00000314737 3858 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 PAM-204ENST00000348126 3622 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 EPS15L1-201ENST00000248070 2924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 POPDC2-208ENST00000493094 1837 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
NKX2-5P52952 SOD2-201ENST00000337404 991 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NKX2-5P52952 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
NKX2-5P52952 BX005266.1-201ENST00000473402 457 ntBASIC12.54□□□□□ -0.4
NKX2-5P52952 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.54□□□□□ -0.4
NKX2-5P52952 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 GLDC-219ENST00000640208 420 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 AC008620.2-201ENST00000510294 1569 ntBASIC12.54□□□□□ -0.4
NKX2-5P52952 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.54□□□□□ -0.4
NKX2-5P52952 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 AC009123.1-202ENST00000565643 2551 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 CSAD-201ENST00000267085 2645 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 MME-204ENST00000462745 3590 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
NKX2-5P52952 RUFY4-202ENST00000374155 2977 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC12.54□□□□□ -0.4
NKX2-5P52952 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
NKX2-5P52952 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms