Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC015922.1-201ENST00000421102 1152 ntBASIC11.77□□□□□ -0.53
CDC34P49427 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 AC079781.3-201ENST00000449110 356 ntBASIC11.77□□□□□ -0.53
CDC34P49427 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 AC004066.1-201ENST00000502488 802 ntBASIC11.77□□□□□ -0.53
CDC34P49427 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 AC079140.1-201ENST00000508039 487 ntBASIC11.77□□□□□ -0.53
CDC34P49427 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC11.77□□□□□ -0.53
CDC34P49427 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC11.77□□□□□ -0.53
CDC34P49427 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 AC026120.1-201ENST00000611536 926 ntBASIC11.77□□□□□ -0.53
CDC34P49427 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 PRICKLE1-203ENST00000455697 4277 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 TP73-209ENST00000603362 1668 ntTSL 5 BASIC11.77□□□□□ -0.53
CDC34P49427 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
CDC34P49427 MLXIP-208ENST00000538698 5097 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 AC020658.7-201ENST00000624274 2442 ntBASIC11.77□□□□□ -0.53
CDC34P49427 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 KRT42P-202ENST00000438131 2895 ntTSL 2 BASIC11.77□□□□□ -0.53
CDC34P49427 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
CDC34P49427 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC34P49427 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 TP73-213ENST00000604479 1623 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 OR52A1-202ENST00000380367 9783 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC34P49427 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 ADH5P3-201ENST00000433842 1137 ntBASIC11.76□□□□□ -0.53
CDC34P49427 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
CDC34P49427 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 BANF1P1-201ENST00000553684 263 ntBASIC11.76□□□□□ -0.53
CDC34P49427 AP001005.1-201ENST00000571755 1248 ntBASIC11.76□□□□□ -0.53
CDC34P49427 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 INO80C-210ENST00000590757 595 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC11.76□□□□□ -0.53
CDC34P49427 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 RN7SL832P-201ENST00000607781 1756 ntBASIC11.76□□□□□ -0.53
CDC34P49427 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 C9orf106-201ENST00000316786 3145 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 KRT8P12-202ENST00000472924 1397 ntBASIC11.76□□□□□ -0.53
CDC34P49427 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 BAHD1-203ENST00000561234 4698 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
CDC34P49427 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC11.76□□□□□ -0.53
CDC34P49427 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.76□□□□□ -0.53
CDC34P49427 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC11.76□□□□□ -0.53
CDC34P49427 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CDC34P49427 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC11.75□□□□□ -0.53
CDC34P49427 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 STRA6-206ENST00000449139 2732 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
CDC34P49427 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
CDC34P49427 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
CDC34P49427 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms