Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.9□□□□□ -0.18
CHMP24386 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 MGST3-203ENST00000367885 680 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.9□□□□□ -0.18
CHMP24386 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
CHMP24386 AC005229.1-201ENST00000392885 409 ntBASIC13.9□□□□□ -0.18
CHMP24386 MXI1-205ENST00000393134 889 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
CHMP24386 PGGT1BP2-201ENST00000398621 1028 ntBASIC13.9□□□□□ -0.18
CHMP24386 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.9□□□□□ -0.18
CHMP24386 ARSEP1-201ENST00000420443 635 ntBASIC13.9□□□□□ -0.18
CHMP24386 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.9□□□□□ -0.18
CHMP24386 AC234783.1-201ENST00000441761 496 ntBASIC13.9□□□□□ -0.18
CHMP24386 AC012441.1-201ENST00000446669 685 ntBASIC13.9□□□□□ -0.18
CHMP24386 AC093433.1-201ENST00000458048 571 ntBASIC13.9□□□□□ -0.18
CHMP24386 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 AC022137.2-201ENST00000503482 481 ntBASIC13.9□□□□□ -0.18
CHMP24386 USP32P1-208ENST00000506594 1164 ntBASIC13.9□□□□□ -0.18
CHMP24386 IGHV3-71-201ENST00000523324 359 ntBASIC13.9□□□□□ -0.18
CHMP24386 SLC25A47P1-201ENST00000531577 414 ntBASIC13.9□□□□□ -0.18
CHMP24386 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.9□□□□□ -0.18
CHMP24386 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC13.9□□□□□ -0.18
CHMP24386 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.9□□□□□ -0.18
CHMP24386 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.9□□□□□ -0.18
CHMP24386 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC13.9□□□□□ -0.18
CHMP24386 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CHMP24386 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CHMP24386 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
CHMP24386 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
CHMP24386 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CHMP24386 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.9□□□□□ -0.19
CHMP24386 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.9□□□□□ -0.19
CHMP24386 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
CHMP24386 AC067750.1-201ENST00000608826 6545 ntBASIC13.9□□□□□ -0.19
CHMP24386 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 MST1P2-201ENST00000457982 2291 ntBASIC13.89□□□□□ -0.19
CHMP24386 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHMP24386 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
CHMP24386 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC13.89□□□□□ -0.19
CHMP24386 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.89□□□□□ -0.19
CHMP24386 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
CHMP24386 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 TMEM14DP-201ENST00000422205 345 ntBASIC13.89□□□□□ -0.19
CHMP24386 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 AL355864.2-201ENST00000447420 863 ntBASIC13.89□□□□□ -0.19
CHMP24386 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CHMP24386 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.89□□□□□ -0.19
CHMP24386 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.89□□□□□ -0.19
CHMP24386 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC13.89□□□□□ -0.19
CHMP24386 APRT-204ENST00000563655 709 ntTSL 5 BASIC13.89□□□□□ -0.19
CHMP24386 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC13.89□□□□□ -0.19
CHMP24386 KSR1-207ENST00000578981 748 ntTSL 4 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms