Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.7□□□□□ -0.38
CCL1P22362 AC104506.1-201ENST00000609247 429 ntBASIC12.7□□□□□ -0.38
CCL1P22362 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
CCL1P22362 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC12.7□□□□□ -0.38
CCL1P22362 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 AC023794.5-201ENST00000564380 2157 ntBASIC12.7□□□□□ -0.38
CCL1P22362 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
CCL1P22362 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 SMYD5-202ENST00000389501 2593 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
CCL1P22362 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 AC004945.1-201ENST00000416738 983 ntBASIC12.69□□□□□ -0.38
CCL1P22362 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 AL161932.2-201ENST00000435436 679 ntBASIC12.69□□□□□ -0.38
CCL1P22362 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 AP001889.1-201ENST00000525414 633 ntBASIC12.69□□□□□ -0.38
CCL1P22362 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC12.69□□□□□ -0.38
CCL1P22362 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CCL1P22362 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CCL1P22362 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 HSPH1-201ENST00000320027 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CCL1P22362 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC12.69□□□□□ -0.38
CCL1P22362 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.68□□□□□ -0.38
CCL1P22362 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CCL1P22362 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.68□□□□□ -0.38
CCL1P22362 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms