Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 AC027601.5-201ENST00000624065 2482 ntBASIC14.97□□□□□ -0.01
HLA-DQB2P05538 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DQB2P05538 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC090505.1-201ENST00000430515 1834 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 TISP43-201ENST00000409793 538 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 ATP5G2P4-201ENST00000442175 420 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 E2F3P2-201ENST00000447755 1422 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 BNIP3P42-201ENST00000454982 569 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC100850.1-201ENST00000506768 649 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 BNIP3P29-201ENST00000598302 571 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC011447.5-201ENST00000616168 564 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 AC011498.7-201ENST00000624986 2027 ntBASIC14.96□□□□□ -0.01
HLA-DQB2P05538 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DQB2P05538 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 TKT-201ENST00000296289 1931 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DQB2P05538 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AC152010.1-201ENST00000415779 2006 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DQB2P05538 YBX1P6-201ENST00000442962 1002 ntBASIC14.95□□□□□ -0.02
HLA-DQB2P05538 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms