Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
VTNP04004 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
VTNP04004 AC009093.10-201ENST00000641956 1442 ntBASIC16.11■□□□□ 0.17
VTNP04004 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
VTNP04004 RER1-203ENST00000378513 3000 ntTSL 3 BASIC16.11■□□□□ 0.17
VTNP04004 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 DBET-201ENST00000630918 3363 ntBASIC16.1■□□□□ 0.17
VTNP04004 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 GGCT-203ENST00000409144 836 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 PARVG-202ENST00000415224 999 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 XBP1P1-201ENST00000436573 652 ntBASIC16.1■□□□□ 0.17
VTNP04004 EEF1DP6-201ENST00000449232 372 ntBASIC16.1■□□□□ 0.17
VTNP04004 AL353637.1-201ENST00000451571 732 ntBASIC16.1■□□□□ 0.17
VTNP04004 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC16.1■□□□□ 0.17
VTNP04004 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.1■□□□□ 0.17
VTNP04004 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.1■□□□□ 0.17
VTNP04004 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC16.1■□□□□ 0.17
VTNP04004 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC16.1■□□□□ 0.17
VTNP04004 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 AC104640.1-201ENST00000562617 2109 ntBASIC16.1■□□□□ 0.17
VTNP04004 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 KHSRPP1-201ENST00000427983 1768 ntBASIC16.1■□□□□ 0.17
VTNP04004 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.1■□□□□ 0.17
VTNP04004 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
VTNP04004 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
VTNP04004 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
VTNP04004 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
VTNP04004 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.09■□□□□ 0.17
VTNP04004 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
VTNP04004 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC16.09■□□□□ 0.17
VTNP04004 AL451042.2-201ENST00000424774 904 ntTSL 2 BASIC16.09■□□□□ 0.17
VTNP04004 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 AC234782.1-201ENST00000451950 919 ntBASIC16.09■□□□□ 0.17
VTNP04004 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 IGLV3-15-201ENST00000518356 244 ntBASIC16.09■□□□□ 0.17
VTNP04004 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.09■□□□□ 0.17
VTNP04004 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC16.09■□□□□ 0.17
VTNP04004 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.09■□□□□ 0.17
VTNP04004 AC242376.1-201ENST00000559033 726 ntBASIC16.09■□□□□ 0.17
VTNP04004 MIR4754-201ENST00000582477 89 ntBASIC16.09■□□□□ 0.17
VTNP04004 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.09■□□□□ 0.17
VTNP04004 MEG3_2.1-201ENST00000611456 105 ntBASIC16.09■□□□□ 0.17
VTNP04004 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
VTNP04004 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms