Protein–RNA interactions for Protein: P01920

HLA-DQB1, HLA class II histocompatibility antigen, DQ beta 1 chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1P01920 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HLA-DQB1P01920 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 TGM1-201ENST00000206765 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AC009474.1-201ENST00000455096 1565 ntBASIC12.79□□□□□ -0.36
HLA-DQB1P01920 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AL627223.1-201ENST00000416693 442 ntBASIC12.79□□□□□ -0.36
HLA-DQB1P01920 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 MTND6P24-201ENST00000440466 518 ntBASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AC005829.1-201ENST00000570002 483 ntBASIC12.79□□□□□ -0.36
HLA-DQB1P01920 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 HFE2-206ENST00000634927 506 ntTSL 4 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 CYB561-202ENST00000392975 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 CCDC88C-201ENST00000331194 3104 ntTSL 5 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 JUN-201ENST00000371222 3540 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HLA-DQB1P01920 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 DSN1-201ENST00000373734 1915 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AGAP12P-201ENST00000585227 2359 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 MIR574-201ENST00000385209 96 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 GPS2P2-201ENST00000430745 888 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 RBPMS2P1-201ENST00000437762 623 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AC093520.2-201ENST00000561830 333 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 MIR497HG-202ENST00000572453 3838 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AL033527.5-202ENST00000641632 1098 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 AC010970.1-201ENST00000445125 1848 ntBASIC12.78□□□□□ -0.36
HLA-DQB1P01920 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HLA-DQB1P01920 RGS3-205ENST00000374134 2862 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms