Protein–RNA interactions for Protein: P01375

TNF, Tumor necrosis factor, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFP01375 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 AC239868.1-201ENST00000369385 493 ntBASIC14.37□□□□□ -0.11
TNFP01375 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 HLA-DQB2-229ENST00000411527 1059 ntBASIC14.37□□□□□ -0.11
TNFP01375 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFP01375 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFP01375 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFP01375 ISCA2P1-201ENST00000425548 448 ntBASIC14.37□□□□□ -0.11
TNFP01375 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 AL596276.2-201ENST00000447525 331 ntBASIC14.37□□□□□ -0.11
TNFP01375 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFP01375 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFP01375 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.37□□□□□ -0.11
TNFP01375 CENPX-208ENST00000584347 799 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 HCG18-245ENST00000602550 559 ntTSL 4 BASIC14.37□□□□□ -0.11
TNFP01375 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 AC015967.2-201ENST00000624092 234 ntBASIC14.37□□□□□ -0.11
TNFP01375 AC006435.4-201ENST00000625037 234 ntBASIC14.37□□□□□ -0.11
TNFP01375 AL356737.1-201ENST00000634391 234 ntBASIC14.37□□□□□ -0.11
TNFP01375 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 CYP4F23P-201ENST00000593402 1579 ntBASIC14.37□□□□□ -0.11
TNFP01375 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TNFP01375 LINC00528-201ENST00000600723 2160 ntBASIC14.37□□□□□ -0.11
TNFP01375 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 RAN-210ENST00000541630 1475 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 KRT8P19-201ENST00000551916 1455 ntBASIC14.37□□□□□ -0.11
TNFP01375 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.37□□□□□ -0.11
TNFP01375 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.37□□□□□ -0.11
TNFP01375 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TNFP01375 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 AC092384.3-202ENST00000564646 2873 ntBASIC14.36□□□□□ -0.11
TNFP01375 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 KRT8P28-201ENST00000433288 1390 ntBASIC14.36□□□□□ -0.11
TNFP01375 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 TSPY26P-202ENST00000565928 3884 ntBASIC14.36□□□□□ -0.11
TNFP01375 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFP01375 PRTFDC1-202ENST00000376376 741 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 AC092506.1-202ENST00000401022 528 ntBASIC14.36□□□□□ -0.11
TNFP01375 AC007274.2-201ENST00000421675 662 ntBASIC14.36□□□□□ -0.11
TNFP01375 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.36□□□□□ -0.11
TNFP01375 AC134698.3-201ENST00000523880 214 ntBASIC14.36□□□□□ -0.11
TNFP01375 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 FOS-206ENST00000555347 1280 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 AC020922.3-201ENST00000595064 547 ntBASIC14.36□□□□□ -0.11
TNFP01375 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.36□□□□□ -0.11
TNFP01375 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TNFP01375 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC14.36□□□□□ -0.11
TNFP01375 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
TNFP01375 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms