Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 AJ011931.1-201ENST00000618749 2492 ntBASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
NPIPA2E9PIF3 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AL136309.1-201ENST00000403917 691 ntBASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AC100850.1-201ENST00000506768 649 ntBASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AC126915.1-201ENST00000522847 1038 ntBASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ACTG1P17-201ENST00000558391 1119 ntBASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AL451050.2-201ENST00000606967 682 ntBASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
NPIPA2E9PIF3 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AC138028.6-201ENST00000616106 1482 ntBASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 SLC25A24P2-201ENST00000415059 510 ntBASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 CHMP1AP1-201ENST00000445563 662 ntBASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AC021723.1-201ENST00000486306 515 ntBASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 AC084346.2-201ENST00000607097 949 ntBASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
NPIPA2E9PIF3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms