Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 APOA1-205ENST00000375329 927 ntTSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 CD81-207ENST00000481687 890 ntTSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 RRP7BP-205ENST00000566851 833 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AL136370.1-201ENST00000608166 691 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC008761.3-201ENST00000624803 892 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 AL603764.1-201ENST00000636452 321 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
RCCD1A6NED2 AC019294.4-201ENST00000561777 2905 ntBASIC15.74■□□□□ 0.11
RCCD1A6NED2 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 FAM156A-221ENST00000622447 3757 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
RCCD1A6NED2 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 NUTM2HP-201ENST00000442076 2498 ntBASIC15.73■□□□□ 0.11
RCCD1A6NED2 AC068760.1-201ENST00000493579 1953 ntBASIC15.73■□□□□ 0.11
RCCD1A6NED2 AL359183.1-201ENST00000623796 2132 ntBASIC15.73■□□□□ 0.11
RCCD1A6NED2 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 USE1-206ENST00000595101 1776 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MYL10-201ENST00000223167 1009 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 AL357833.2-202ENST00000413757 372 ntTSL 3 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MYCLP2-201ENST00000449268 967 ntBASIC15.73■□□□□ 0.11
RCCD1A6NED2 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.73■□□□□ 0.11
RCCD1A6NED2 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
RCCD1A6NED2 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.73■□□□□ 0.11
RCCD1A6NED2 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
RCCD1A6NED2 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
RCCD1A6NED2 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms