Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EDEM2-202ENST00000374492 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC027601.5-201ENST00000624065 2482 ntBASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC097359.2-201ENST00000604992 2389 ntBASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC025279.2-201ENST00000569730 653 ntBASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SAMD11P1-201ENST00000571429 661 ntBASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 TNN-203ENST00000622870 3719 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.96□□□□□ -0.49
TCRBV4S1A1TA0A5B7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLEKHN1-202ENST00000379409 2455 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC006504.5-208ENST00000588784 2401 ntBASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC126335.2-201ENST00000623362 4637 ntBASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
TCRBV4S1A1TA0A5B7 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LINC01230-201ENST00000625222 3017 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TUBB1P2-201ENST00000422712 1306 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TUBB1P1-201ENST00000503144 1300 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GUK1-206ENST00000366723 845 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC026954.1-201ENST00000429771 1293 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 ACTBP11-201ENST00000436287 1126 ntBASIC11.95□□□□□ -0.5
TCRBV4S1A1TA0A5B7 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms