Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 CEND1P1-201ENST00000451006 455 ntBASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 MIR6080-201ENST00000617359 66 ntBASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 MKL1-201ENST00000355630 4496 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 NOX5-201ENST00000260364 8592 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 XG-201ENST00000381174 2315 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 GTF2IRD1-202ENST00000424337 3077 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CETP-203ENST00000566128 1733 ntTSL 5 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 USP19-207ENST00000434032 4677 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
TRAV18A0A075B6X5 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 DUOX2-205ENST00000603300 6345 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 MYADML-201ENST00000474610 2147 ntBASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NMU-202ENST00000505262 693 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC093520.2-201ENST00000561830 333 ntBASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 RPS15-202ENST00000585665 467 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 IRF6-204ENST00000542854 4256 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 PAG1-201ENST00000220597 10744 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AGL-203ENST00000361915 7368 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 PRDM15-207ENST00000447207 4928 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 NUTM2HP-201ENST00000442076 2498 ntBASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SPHK2-201ENST00000245222 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC011840.2-201ENST00000563063 1520 ntBASIC12.78□□□□□ -0.36
TRAV18A0A075B6X5 AC108002.1-201ENST00000520572 5684 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
TRAV18A0A075B6X5 AL158070.2-201ENST00000623713 1621 ntBASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms