Protein–RNA interactions for Protein: Q9Y366

IFT52, Intraflagellar transport protein 52 homolog, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT52Q9Y366 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 GNAQP1-201ENST00000444815 1067 ntBASIC13.96□□□□□ -0.17
IFT52Q9Y366 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 INGX-202ENST00000489074 768 ntBASIC13.96□□□□□ -0.17
IFT52Q9Y366 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 RFPL4AP1-201ENST00000530883 850 ntBASIC13.96□□□□□ -0.17
IFT52Q9Y366 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 DUX4L47-201ENST00000566374 394 ntBASIC13.96□□□□□ -0.17
IFT52Q9Y366 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
IFT52Q9Y366 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
IFT52Q9Y366 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.96□□□□□ -0.18
IFT52Q9Y366 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 RBL1-201ENST00000344359 3225 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 AL391825.1-201ENST00000457671 1364 ntBASIC13.96□□□□□ -0.18
IFT52Q9Y366 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
IFT52Q9Y366 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 AC131902.2-201ENST00000566892 2172 ntBASIC13.95□□□□□ -0.18
IFT52Q9Y366 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 AGPAT3-205ENST00000398063 5767 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 INVS-201ENST00000262456 2968 ntTSL 5 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SOCS2P1-201ENST00000417727 557 ntBASIC13.95□□□□□ -0.18
IFT52Q9Y366 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 DFFBP1-201ENST00000433250 979 ntBASIC13.95□□□□□ -0.18
IFT52Q9Y366 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
IFT52Q9Y366 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.95□□□□□ -0.18
IFT52Q9Y366 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms