Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 HLA-V-201ENST00000429037 534 ntBASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 AC026410.3-201ENST00000514280 936 ntBASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 AC104794.3-201ENST00000566840 1248 ntBASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 SRD5A3P1-201ENST00000603021 949 ntBASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
AMBRA1Q9C0C7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FAM90A12P-201ENST00000519497 2375 ntBASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FAM90A24P-201ENST00000520792 2369 ntBASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 RPS15-202ENST00000585665 467 ntTSL 3 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 AC004790.1-201ENST00000612686 536 ntBASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
AMBRA1Q9C0C7 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
AMBRA1Q9C0C7 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.9□□□□□ -0.19
AMBRA1Q9C0C7 NLRP2B-201ENST00000434992 3194 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AC015909.5-201ENST00000624336 2266 ntBASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 KIAA0513-207ENST00000567328 1873 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
AMBRA1Q9C0C7 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 76 ms