Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 PTPRVP-205ENST00000641549 5067 ntBASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 AC007787.1-201ENST00000588095 1583 ntBASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 USP35-204ENST00000530267 2419 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CHRDL1Q9BU40 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TP73-203ENST00000357733 4899 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MEP1AP4-201ENST00000423244 1087 ntBASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC026410.3-201ENST00000514280 936 ntBASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AL355385.1-201ENST00000606123 409 ntBASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AL157414.3-201ENST00000624276 1954 ntBASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 FANCC-201ENST00000289081 4585 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 SPTBN2-209ENST00000533211 8128 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC11.86□□□□□ -0.51
CHRDL1Q9BU40 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
CHRDL1Q9BU40 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms