Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 MESTP3-201ENST00000503460 968 ntBASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 RN7SL48P-201ENST00000579283 293 ntBASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 AC004466.1-201ENST00000599515 1080 ntBASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 STK40-201ENST00000359297 4837 ntTSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 MRPL37P1-201ENST00000592451 1337 ntBASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 MKLN1-203ENST00000421797 2460 ntTSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
LSMEM1Q8N8F7 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 RN7SKP230-201ENST00000365642 335 ntBASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 DGCR5-201ENST00000399539 862 ntBASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 AL355385.1-201ENST00000606123 409 ntBASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 AC138696.2-201ENST00000607376 223 ntBASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 AC134312.5-201ENST00000568031 1313 ntBASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LSMEM1Q8N8F7 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 MYADML-201ENST00000474610 2147 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 MSTO2P-201ENST00000314835 1709 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 POM121L8P-201ENST00000417732 1281 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 POM121L9P-203ENST00000441984 1285 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 CRB3P1-201ENST00000449338 276 ntBASIC13.6□□□□□ -0.23
LSMEM1Q8N8F7 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms