Protein–RNA interactions for Protein: Q68CJ9

CREB3L3, Cyclic AMP-responsive element-binding protein 3-like protein 3, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CREB3L3Q68CJ9 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CREB3L3Q68CJ9 AC016397.2-201ENST00000624848 1985 ntBASIC17.57■□□□□ 0.4
CREB3L3Q68CJ9 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CREB3L3Q68CJ9 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AHCYP2-201ENST00000430630 1300 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AC079776.1-201ENST00000401540 1152 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AC112492.5-201ENST00000421897 457 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AC026954.1-201ENST00000429771 1293 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 U91328.1-201ENST00000437528 223 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CHMP1AP1-201ENST00000445563 662 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 KRT17P8-201ENST00000540749 863 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 RBM7-207ENST00000544582 692 ntTSL 3 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CICP16-201ENST00000502609 2813 ntBASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CREB3L3Q68CJ9 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CSRP1-201ENST00000340006 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ANKRD19P-201ENST00000338192 862 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CICP12-201ENST00000455801 843 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 SORD2P-201ENST00000558556 1069 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PPY2P-201ENST00000582808 702 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AL512343.1-201ENST00000605837 169 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AL162274.1-201ENST00000617191 1098 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 AC020910.6-201ENST00000623084 1459 ntBASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CREB3L3Q68CJ9 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms