Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 RNF4-216ENST00000511859 1373 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 FTHL17-201ENST00000359202 813 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AL137244.1-201ENST00000422931 865 ntBASIC13.49□□□□□ -0.25
CACNA1BQ00975 SNX3-204ENST00000426155 1072 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC074389.3-201ENST00000450458 454 ntTSL 3 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC006122.1-201ENST00000493323 440 ntBASIC13.49□□□□□ -0.25
CACNA1BQ00975 IGHV1-12-201ENST00000518307 205 ntBASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 AL121992.3-201ENST00000606186 346 ntBASIC13.49□□□□□ -0.25
CACNA1BQ00975 AC138696.2-201ENST00000607376 223 ntBASIC13.49□□□□□ -0.25
CACNA1BQ00975 AL135936.1-201ENST00000617956 998 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 SNHG5-213ENST00000622963 753 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 GABARAPL1-219ENST00000629504 379 ntTSL 4 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CACNA1BQ00975 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC13.49□□□□□ -0.25
CACNA1BQ00975 WFDC3-201ENST00000243938 1000 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 ID2-AS1-201ENST00000412712 953 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 DMKN-211ENST00000436012 848 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC099548.2-201ENST00000491047 571 ntTSL 4 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC099343.1-201ENST00000513481 609 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 TRIQK-219ENST00000523580 1630 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC008741.2-201ENST00000612792 3115 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AL359092.2-201ENST00000423330 585 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 CA5BP1-205ENST00000435806 1064 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 RPL18AP8-201ENST00000486071 528 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 AC099328.1-201ENST00000498809 1030 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 SPRY4-AS1-206ENST00000515288 539 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 RPL30-213ENST00000523172 274 ntTSL 5 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 PMM2-216ENST00000569958 698 ntTSL 2 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 SNHG15-210ENST00000585030 953 ntTSL 3 BASIC13.48□□□□□ -0.25
CACNA1BQ00975 MIR6720-201ENST00000611664 98 ntBASIC13.48□□□□□ -0.25
CACNA1BQ00975 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CACNA1BQ00975 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms