Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14□□□□□ -0.17
RPS3AP61247 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 AL162726.2-201ENST00000438986 1017 ntBASIC14□□□□□ -0.17
RPS3AP61247 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC14□□□□□ -0.17
RPS3AP61247 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14□□□□□ -0.17
RPS3AP61247 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 WASH4P-201ENST00000564273 1246 ntBASIC14□□□□□ -0.17
RPS3AP61247 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14□□□□□ -0.17
RPS3AP61247 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 AL049840.4-201ENST00000602422 811 ntBASIC14□□□□□ -0.17
RPS3AP61247 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 AC131902.2-201ENST00000566892 2172 ntBASIC14□□□□□ -0.17
RPS3AP61247 FOXD4L5-201ENST00000377420 3109 ntAPPRIS P1 BASIC14□□□□□ -0.17
RPS3AP61247 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 C7orf57-202ENST00000420324 1957 ntTSL 5 BASIC14□□□□□ -0.17
RPS3AP61247 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
RPS3AP61247 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14□□□□□ -0.17
RPS3AP61247 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 MST1P2-201ENST00000457982 2291 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 CD1B-201ENST00000368168 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 NME2P1-201ENST00000426182 414 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.99□□□□□ -0.17
RPS3AP61247 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
RPS3AP61247 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC13.99□□□□□ -0.17
RPS3AP61247 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.99□□□□□ -0.17
RPS3AP61247 BRI3BPP1-201ENST00000594224 787 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 AL035252.4-201ENST00000624174 288 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 AL033527.5-201ENST00000641382 801 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 CHFR-205ENST00000450056 3250 ntTSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.99□□□□□ -0.17
RPS3AP61247 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
RPS3AP61247 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
RPS3AP61247 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
RPS3AP61247 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
RPS3AP61247 INTS4P2-202ENST00000614726 2019 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
RPS3AP61247 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.98□□□□□ -0.17
RPS3AP61247 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
RPS3AP61247 ADAMTS7P1-201ENST00000613213 4793 ntBASIC13.98□□□□□ -0.17
RPS3AP61247 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.7 ms