Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 RN7SKP214-201ENST00000364208 315 ntBASIC14.24□□□□□ -0.13
EPHA4P54764 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
EPHA4P54764 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC14.24□□□□□ -0.13
EPHA4P54764 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC14.24□□□□□ -0.13
EPHA4P54764 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC14.24□□□□□ -0.13
EPHA4P54764 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA4P54764 AL161670.2-201ENST00000557650 1227 ntBASIC14.24□□□□□ -0.13
EPHA4P54764 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC14.24□□□□□ -0.13
EPHA4P54764 AC005962.1-201ENST00000584100 773 ntBASIC14.24□□□□□ -0.13
EPHA4P54764 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC14.24□□□□□ -0.13
EPHA4P54764 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
EPHA4P54764 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.24□□□□□ -0.13
EPHA4P54764 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.24□□□□□ -0.13
EPHA4P54764 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.24□□□□□ -0.13
EPHA4P54764 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.24□□□□□ -0.13
EPHA4P54764 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
EPHA4P54764 CDPF1-203ENST00000404583 1439 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
EPHA4P54764 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 MBLAC2-202ENST00000514906 1936 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 AL136172.1-201ENST00000598590 1394 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
EPHA4P54764 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 AC078875.1-201ENST00000431907 724 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 AL645933.1-201ENST00000440087 609 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 UPF3AP2-201ENST00000457924 1132 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 TSACC-208ENST00000481479 741 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC14.23□□□□□ -0.13
EPHA4P54764 RCC2P8-201ENST00000502779 1035 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 AC024475.1-201ENST00000528480 605 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 AL160314.3-201ENST00000556041 767 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 ARL16-210ENST00000574938 751 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC14.23□□□□□ -0.13
EPHA4P54764 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC14.23□□□□□ -0.13
EPHA4P54764 PAX6-247ENST00000638965 979 ntTSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 NAP1L6-202ENST00000641404 1222 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 AC005089.1-201ENST00000619486 2241 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 AL157791.1-201ENST00000553667 1699 ntBASIC14.23□□□□□ -0.13
EPHA4P54764 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC14.23□□□□□ -0.13
EPHA4P54764 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
EPHA4P54764 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
EPHA4P54764 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC14.22□□□□□ -0.13
EPHA4P54764 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms