Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 KRT18P36-201ENST00000411618 1276 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 ACTG1P2-201ENST00000415776 1125 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 ACTG1P11-201ENST00000425411 1125 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 AC078875.1-201ENST00000431907 724 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 AC011742.3-201ENST00000439053 820 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC13.96□□□□□ -0.17
GABRA4P48169 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.96□□□□□ -0.17
GABRA4P48169 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC13.96□□□□□ -0.17
GABRA4P48169 AC133540.1-201ENST00000620845 1019 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.96□□□□□ -0.17
GABRA4P48169 AC100757.4-201ENST00000626934 759 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.96□□□□□ -0.17
GABRA4P48169 AL805961.1-203ENST00000641078 1258 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 SPO11-203ENST00000371263 1834 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.96□□□□□ -0.17
GABRA4P48169 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
GABRA4P48169 AC015688.4-201ENST00000580780 1647 ntBASIC13.96□□□□□ -0.17
GABRA4P48169 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
GABRA4P48169 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.96□□□□□ -0.18
GABRA4P48169 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC13.96□□□□□ -0.18
GABRA4P48169 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.96□□□□□ -0.18
GABRA4P48169 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.96□□□□□ -0.18
GABRA4P48169 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GABRA4P48169 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GABRA4P48169 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC13.96□□□□□ -0.18
GABRA4P48169 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
GABRA4P48169 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.96□□□□□ -0.18
GABRA4P48169 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
GABRA4P48169 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 IGHJ2P-201ENST00000454480 60 ntBASIC13.95□□□□□ -0.18
GABRA4P48169 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.95□□□□□ -0.18
GABRA4P48169 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC13.95□□□□□ -0.18
GABRA4P48169 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GABRA4P48169 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 AL606495.2-201ENST00000605867 535 ntBASIC13.95□□□□□ -0.18
GABRA4P48169 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GABRA4P48169 TNRC18P2-201ENST00000417666 2714 ntBASIC13.95□□□□□ -0.18
GABRA4P48169 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC13.95□□□□□ -0.18
GABRA4P48169 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
GABRA4P48169 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
GABRA4P48169 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
GABRA4P48169 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
GABRA4P48169 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
GABRA4P48169 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms