Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC14.94□□□□□ -0.02
CHRNA4P43681 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHRNA4P43681 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CHRNA4P43681 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA4P43681 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC14.93□□□□□ -0.02
CHRNA4P43681 HILS1-202ENST00000545329 423 ntBASIC14.93□□□□□ -0.02
CHRNA4P43681 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.93□□□□□ -0.02
CHRNA4P43681 RN7SL713P-201ENST00000582127 302 ntBASIC14.93□□□□□ -0.02
CHRNA4P43681 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 BX088702.1-201ENST00000610784 235 ntBASIC14.93□□□□□ -0.02
CHRNA4P43681 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
CHRNA4P43681 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA4P43681 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA4P43681 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.93□□□□□ -0.02
CHRNA4P43681 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
CHRNA4P43681 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.93□□□□□ -0.02
CHRNA4P43681 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
CHRNA4P43681 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHRNA4P43681 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 AHCYP2-201ENST00000430630 1300 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 AC063926.2-201ENST00000623766 1308 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 GSN-209ENST00000449733 2702 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 WNT2B-202ENST00000369684 3818 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 C1QTNF6-203ENST00000434784 975 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 KLF2P4-201ENST00000451959 1225 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNA4P43681 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNA4P43681 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC103988.2-201ENST00000561804 725 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 C2orf69P2-201ENST00000562032 1123 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.92□□□□□ -0.02
CHRNA4P43681 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC14.92□□□□□ -0.02
CHRNA4P43681 MIR6775-201ENST00000617557 69 ntBASIC14.92□□□□□ -0.02
CHRNA4P43681 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
CHRNA4P43681 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
CHRNA4P43681 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms