Protein–RNA interactions for Protein: P43354

NR4A2, Nuclear receptor subfamily 4 group A member 2, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A2P43354 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A2P43354 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
NR4A2P43354 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
NR4A2P43354 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC13.59□□□□□ -0.23
NR4A2P43354 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
NR4A2P43354 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A2P43354 AL391825.1-201ENST00000457671 1364 ntBASIC13.58□□□□□ -0.23
NR4A2P43354 KRT8P12-202ENST00000472924 1397 ntBASIC13.58□□□□□ -0.23
NR4A2P43354 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A2P43354 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
NR4A2P43354 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A2P43354 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
NR4A2P43354 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.58□□□□□ -0.23
NR4A2P43354 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
NR4A2P43354 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 AC098614.1-201ENST00000368528 745 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 PTPA-220ENST00000436883 532 ntTSL 4 BASIC13.58□□□□□ -0.24
NR4A2P43354 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 GNAQP1-201ENST00000444815 1067 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 AC138969.3-201ENST00000546612 1459 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 AC138932.2-201ENST00000548268 1459 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 AC126755.4-201ENST00000549796 1459 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 AC018892.3-201ENST00000623986 2499 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC13.58□□□□□ -0.24
NR4A2P43354 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.58□□□□□ -0.24
NR4A2P43354 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 BEND3P3-201ENST00000611030 2440 ntBASIC13.58□□□□□ -0.24
NR4A2P43354 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
NR4A2P43354 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
NR4A2P43354 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.57□□□□□ -0.24
NR4A2P43354 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.57□□□□□ -0.24
NR4A2P43354 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
NR4A2P43354 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 NAA50-208ENST00000497255 789 ntTSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 AC093004.1-201ENST00000508850 424 ntBASIC13.57□□□□□ -0.24
NR4A2P43354 DOC2GP-202ENST00000514950 1163 ntBASIC13.57□□□□□ -0.24
NR4A2P43354 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC13.57□□□□□ -0.24
NR4A2P43354 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC13.57□□□□□ -0.24
NR4A2P43354 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.57□□□□□ -0.24
NR4A2P43354 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.57□□□□□ -0.24
NR4A2P43354 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.57□□□□□ -0.24
NR4A2P43354 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.57□□□□□ -0.24
NR4A2P43354 AL033527.5-202ENST00000641632 1098 ntBASIC13.57□□□□□ -0.24
NR4A2P43354 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
NR4A2P43354 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC13.57□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.5 ms